Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SrfQ9JM73 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm7467-201ENSMUST00000185173 652 ntBASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm43906-201ENSMUST00000203194 906 ntBASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 CT025525.1-201ENSMUST00000226325 1054 ntBASIC12.04□□□□□ -0.48
SrfQ9JM73 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
SrfQ9JM73 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Gm42479-201ENSMUST00000198654 1356 ntBASIC12.04□□□□□ -0.48
SrfQ9JM73 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SrfQ9JM73 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 AC136019.1-201ENSMUST00000226503 1412 ntBASIC12.03□□□□□ -0.48
SrfQ9JM73 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm23949-201ENSMUST00000104027 127 ntBASIC12.03□□□□□ -0.48
SrfQ9JM73 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm14539-201ENSMUST00000117527 174 ntBASIC12.03□□□□□ -0.48
SrfQ9JM73 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.03□□□□□ -0.48
SrfQ9JM73 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
SrfQ9JM73 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.03□□□□□ -0.48
SrfQ9JM73 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SrfQ9JM73 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SrfQ9JM73 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms