Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gm24196-201ENSMUST00000179161 110 ntBASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Gm10012-201ENSMUST00000078252 192 ntBASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61a2Q9JLR1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gm11425-201ENSMUST00000119608 498 ntBASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gm9396-201ENSMUST00000076703 567 ntBASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gm25857-201ENSMUST00000082788 129 ntBASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61a2Q9JLR1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Sec61a2Q9JLR1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Cog3-203ENSMUST00000227473 4197 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Gm11618-201ENSMUST00000117946 267 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Gm11978-201ENSMUST00000122315 466 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Gm27847-201ENSMUST00000183711 107 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Gm27375-201ENSMUST00000183799 107 ntBASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.45□□□□□ -0.58
Sec61a2Q9JLR1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms