Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Gm13316-201ENSMUST00000140537 691 ntBASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.52■□□□□ 0.08
Ripk4Q9ERK0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ripk4Q9ERK0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ripk4Q9ERK0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ripk4Q9ERK0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ripk4Q9ERK0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ripk4Q9ERK0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ripk4Q9ERK0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Gm14726-201ENSMUST00000120623 896 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Gm22121-201ENSMUST00000175148 54 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Mir3102-201ENSMUST00000175555 104 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ripk4Q9ERK0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Gm8099-201ENSMUST00000200510 742 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Gm30285-201ENSMUST00000214614 422 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ripk4Q9ERK0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms