Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm15393-201ENSMUST00000120499 219 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm27772-201ENSMUST00000184900 187 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm18766-201ENSMUST00000189811 808 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm17330-201ENSMUST00000221047 165 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
RTRAFQ9CQE8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Gm19184-201ENSMUST00000196798 928 ntBASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RTRAFQ9CQE8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Gm24543-201ENSMUST00000103867 82 ntBASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
RTRAFQ9CQE8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms