Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm12616-201ENSMUST00000118594 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12624-201ENSMUST00000177615 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12621-201ENSMUST00000177760 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12615-201ENSMUST00000177970 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12622-201ENSMUST00000177975 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12627-201ENSMUST00000178412 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12625-201ENSMUST00000179122 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12614-201ENSMUST00000179586 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm12613-201ENSMUST00000180323 382 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm28450-201ENSMUST00000187349 638 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm8099-201ENSMUST00000200510 742 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm14208-201ENSMUST00000119645 678 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.42□□□□□ -0.74
Prpf8Q99PV0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Prpf8Q99PV0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Gm42997-202ENSMUST00000200321 985 ntBASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.41□□□□□ -0.74
Prpf8Q99PV0 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.41□□□□□ -0.74
Prpf8Q99PV0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Prpf8Q99PV0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms