Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.46□□□□□ -0.41
Trim8Q99PJ2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.46□□□□□ -0.41
Trim8Q99PJ2 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim8Q99PJ2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.46□□□□□ -0.42
Trim8Q99PJ2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm12341-201ENSMUST00000119724 503 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Paupar-201ENSMUST00000194826 3482 ntBASIC12.45□□□□□ -0.42
Trim8Q99PJ2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim8Q99PJ2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim8Q99PJ2 Gm12859-201ENSMUST00000117834 427 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms