Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm8768-201ENSMUST00000220020 826 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.58□□□□□ -0.4
Cdh23Q99PF4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm7904-201ENSMUST00000217049 465 ntBASIC12.57□□□□□ -0.4
Cdh23Q99PF4 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.57□□□□□ -0.4
Cdh23Q99PF4 Gm22594-201ENSMUST00000104251 130 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm13263-201ENSMUST00000121271 838 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm23675-201ENSMUST00000157311 125 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm12407-201ENSMUST00000180219 324 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm29410-201ENSMUST00000188383 694 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Gm45575-201ENSMUST00000210283 548 ntBASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdh23Q99PF4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm14213-201ENSMUST00000119778 768 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdh23Q99PF4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms