Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp1b1Q99LU0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp1b1Q99LU0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp1b1Q99LU0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp1b1Q99LU0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp1b1Q99LU0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp1b1Q99LU0 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp1b1Q99LU0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Chmp1b1Q99LU0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp1b1Q99LU0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp1b1Q99LU0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms