Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm13612-201ENSMUST00000119276 390 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm11434-201ENSMUST00000122379 629 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm25927-201ENSMUST00000175058 117 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm27701-201ENSMUST00000184498 110 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Gm8099-201ENSMUST00000200510 742 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.58□□□□□ -0.56
Lims1Q99JW4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Lims1Q99JW4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm8805-201ENSMUST00000117848 313 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm12384-201ENSMUST00000119228 919 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Proscos-202ENSMUST00000178990 666 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm42599-201ENSMUST00000201308 469 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.57□□□□□ -0.56
Lims1Q99JW4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Lims1Q99JW4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.56□□□□□ -0.56
Lims1Q99JW4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.56□□□□□ -0.56
Lims1Q99JW4 Gm23363-201ENSMUST00000175024 79 ntBASIC11.56□□□□□ -0.56
Lims1Q99JW4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Gm18018-201ENSMUST00000198273 408 ntBASIC11.56□□□□□ -0.56
Lims1Q99JW4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.56□□□□□ -0.56
Lims1Q99JW4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lims1Q99JW4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms