Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm19189-201ENSMUST00000221689 754 ntBASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm43222-201ENSMUST00000199013 603 ntBASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb3Q91XZ7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm21854-201ENSMUST00000179901 471 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm37002-201ENSMUST00000194560 373 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm43124-201ENSMUST00000201878 278 ntBASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb3Q91XZ7 CT572999.1-201ENSMUST00000220315 1260 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms