Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trex1Q91XB0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Gm12176-201ENSMUST00000121420 875 ntBASIC14.51□□□□□ -0.09
Trex1Q91XB0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Gm17812-201ENSMUST00000204935 318 ntBASIC14.51□□□□□ -0.09
Trex1Q91XB0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trex1Q91XB0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm14644-201ENSMUST00000116671 647 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm9083-201ENSMUST00000120423 819 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm37666-201ENSMUST00000194110 866 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm19187-201ENSMUST00000206781 892 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.5□□□□□ -0.09
Trex1Q91XB0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Trex1Q91XB0 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trex1Q91XB0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms