Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc9Q8VC31 Gm42599-201ENSMUST00000201308 469 ntBASIC15.27■□□□□ 0.04
Ccdc9Q8VC31 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.27■□□□□ 0.04
Ccdc9Q8VC31 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc9Q8VC31 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ccdc9Q8VC31 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ccdc9Q8VC31 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Gm15957-201ENSMUST00000118893 974 ntBASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Gm18057-201ENSMUST00000208220 503 ntBASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ccdc9Q8VC31 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Mir1895-201ENSMUST00000122615 79 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm25911-201ENSMUST00000157621 56 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm27920-201ENSMUST00000183953 96 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm27494-201ENSMUST00000184735 189 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm45089-201ENSMUST00000208082 2040 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gm43963-201ENSMUST00000203466 2488 ntBASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ccdc9Q8VC31 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ccdc9Q8VC31 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms