Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Gm44069-201ENSMUST00000204898 506 ntBASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Map1b-203ENSMUST00000223725 2669 ntBASIC10.35□□□□□ -0.75
Nup35Q8R4R6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.34□□□□□ -0.75
Nup35Q8R4R6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nup35Q8R4R6 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm13689-201ENSMUST00000119360 685 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm26308-201ENSMUST00000157768 69 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm29667-201ENSMUST00000190817 490 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm10576-201ENSMUST00000191927 825 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Gm8227-201ENSMUST00000223306 571 ntBASIC10.33□□□□□ -0.76
Nup35Q8R4R6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms