Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Gm43184-201ENSMUST00000197247 542 ntBASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 AC129219.2-201ENSMUST00000224324 701 ntBASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx54Q8K4L0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Gm5621-201ENSMUST00000187303 640 ntBASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Gm7902-201ENSMUST00000198842 947 ntBASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx54Q8K4L0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Ddx54Q8K4L0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm25545-201ENSMUST00000122673 323 ntBASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm37299-201ENSMUST00000193951 826 ntBASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm44329-201ENSMUST00000197469 112 ntBASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm45120-201ENSMUST00000208880 408 ntBASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ddx54Q8K4L0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm13668-201ENSMUST00000119237 1001 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm13937-201ENSMUST00000121000 988 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm6485-201ENSMUST00000160676 439 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm42779-201ENSMUST00000198807 406 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gm5455-201ENSMUST00000058710 715 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Mir483-201ENSMUST00000093631 73 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ddx54Q8K4L0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms