Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col23a1Q8K4G2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col23a1Q8K4G2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Col23a1Q8K4G2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm13916-201ENSMUST00000117368 628 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm14219-201ENSMUST00000120414 288 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm7722-201ENSMUST00000120646 741 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm15566-201ENSMUST00000121130 590 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm23119-201ENSMUST00000158610 140 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col23a1Q8K4G2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm16166-201ENSMUST00000118291 787 ntBASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm17877-201ENSMUST00000192578 814 ntBASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm3619-201ENSMUST00000219947 775 ntBASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col23a1Q8K4G2 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Gm13549-201ENSMUST00000118339 796 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Gm13263-201ENSMUST00000121271 838 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Gm4654-201ENSMUST00000183305 982 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Gm8531-201ENSMUST00000188319 893 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Gm5100-201ENSMUST00000195631 589 ntBASIC15.22■□□□□ 0.03
Col23a1Q8K4G2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms