Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm16202-201ENSMUST00000117532 544 ntBASIC13□□□□□ -0.33
CopaQ8CIE6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13□□□□□ -0.33
CopaQ8CIE6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm43118-201ENSMUST00000199149 775 ntBASIC13□□□□□ -0.33
CopaQ8CIE6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 AC134254.1-201ENSMUST00000221362 167 ntBASIC13□□□□□ -0.33
CopaQ8CIE6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13□□□□□ -0.33
CopaQ8CIE6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Gm43273-201ENSMUST00000199649 2594 ntBASIC13□□□□□ -0.33
CopaQ8CIE6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CopaQ8CIE6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CopaQ8CIE6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CopaQ8CIE6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Gm8805-201ENSMUST00000117848 313 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 Gm25261-201ENSMUST00000157416 134 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 Gm25927-201ENSMUST00000175058 117 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.99□□□□□ -0.33
CopaQ8CIE6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CopaQ8CIE6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.98□□□□□ -0.33
CopaQ8CIE6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Mir8109-201ENSMUST00000184375 117 ntBASIC12.98□□□□□ -0.33
CopaQ8CIE6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.98□□□□□ -0.33
CopaQ8CIE6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.98□□□□□ -0.33
CopaQ8CIE6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CopaQ8CIE6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CopaQ8CIE6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.97□□□□□ -0.33
CopaQ8CIE6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CopaQ8CIE6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms