Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm15371-201ENSMUST00000117057 784 ntBASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm42599-201ENSMUST00000201308 469 ntBASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Itm2b-204ENSMUST00000228637 783 ntBASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lysmd4Q8CC84 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gm12151-201ENSMUST00000121374 290 ntBASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Mir7023-201ENSMUST00000185093 64 ntBASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gm28693-202ENSMUST00000190758 331 ntBASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lysmd4Q8CC84 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms