Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm7809-201ENSMUST00000153199 742 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm9630-201ENSMUST00000178304 885 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim9Q8C7M3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm3890-201ENSMUST00000182416 207 ntBASIC13.98□□□□□ -0.17
Trim9Q8C7M3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm18187-201ENSMUST00000196476 984 ntBASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm44124-201ENSMUST00000204159 472 ntBASIC13.98□□□□□ -0.17
Trim9Q8C7M3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim9Q8C7M3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim9Q8C7M3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms