Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Gm4726-201ENSMUST00000135604 736 ntBASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Gm6019-201ENSMUST00000148369 736 ntBASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cfap54Q8C6S9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm22711-201ENSMUST00000116890 133 ntBASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm14724-201ENSMUST00000118400 537 ntBASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cfap54Q8C6S9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Gm12516-201ENSMUST00000120819 385 ntBASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 Gm12948-201ENSMUST00000119406 682 ntBASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cfap54Q8C6S9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms