Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 AC156025.2-201ENSMUST00000225907 1533 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim35Q8C006 Gm42714-201ENSMUST00000202063 1364 ntBASIC14.09□□□□□ -0.15
Trim35Q8C006 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Gm43255-201ENSMUST00000198885 1437 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim35Q8C006 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm13823-201ENSMUST00000119930 345 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm6620-201ENSMUST00000120113 715 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Mup-ps1-201ENSMUST00000120720 544 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm25807-201ENSMUST00000122783 305 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Ube2uos-201ENSMUST00000142634 608 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm14651-201ENSMUST00000147192 442 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 AC147639.1-201ENSMUST00000224216 661 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 AC118249.1-201ENSMUST00000224822 608 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 AC154646.1-201ENSMUST00000225011 1092 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 CT009494.1-201ENSMUST00000225121 1213 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 AC140451.1-201ENSMUST00000227984 737 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trim35Q8C006 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.08□□□□□ -0.16
Trim35Q8C006 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim35Q8C006 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm32284-201ENSMUST00000213704 1484 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Med6-205ENSMUST00000161598 897 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC14.07□□□□□ -0.16
Trim35Q8C006 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm27622-201ENSMUST00000183779 60 ntBASIC14.07□□□□□ -0.16
Trim35Q8C006 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm44395-201ENSMUST00000197056 153 ntBASIC14.07□□□□□ -0.16
Trim35Q8C006 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm19161-201ENSMUST00000217958 737 ntBASIC14.07□□□□□ -0.16
Trim35Q8C006 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim35Q8C006 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim35Q8C006 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms