Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Gm27622-201ENSMUST00000183779 60 ntBASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Gm5264-201ENSMUST00000190584 848 ntBASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Smco3Q8BQM7 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.46□□□□□ -0.73
Smco3Q8BQM7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Smco3Q8BQM7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm12403-201ENSMUST00000121384 959 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm27533-201ENSMUST00000183800 152 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Smco3Q8BQM7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Smco3Q8BQM7 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms