Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Srrm4Q8BKA3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Gm13392-201ENSMUST00000117708 150 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Gm43630-201ENSMUST00000201550 776 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Srrm4Q8BKA3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.02□□□□□ -0.64
Srrm4Q8BKA3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Snord83b-201ENSMUST00000104546 94 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm17420-201ENSMUST00000164753 153 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm22121-201ENSMUST00000175148 54 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm19309-201ENSMUST00000218295 205 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Srrm4Q8BKA3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Srrm4Q8BKA3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms