Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Samm50Q8BGH2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm16202-201ENSMUST00000117532 544 ntBASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Mir7085-201ENSMUST00000184353 66 ntBASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.9□□□□□ -0.02
Samm50Q8BGH2 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Samm50Q8BGH2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm27731-201ENSMUST00000185192 107 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm29127-201ENSMUST00000188304 517 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm45784-201ENSMUST00000188360 142 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm43818-201ENSMUST00000200605 466 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm40466-201ENSMUST00000212174 422 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm29705-201ENSMUST00000212598 474 ntBASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Samm50Q8BGH2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Gm13226-201ENSMUST00000117838 404 ntBASIC14.88□□□□□ -0.03
Samm50Q8BGH2 Gm11618-201ENSMUST00000117946 267 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms