Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trim6Q8BGE7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm22189-201ENSMUST00000103822 86 ntBASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.49□□□□□ -0.25
Trim6Q8BGE7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim6Q8BGE7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.48□□□□□ -0.25
Trim6Q8BGE7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms