Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim50Q810I2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trim50Q810I2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim50Q810I2 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.4□□□□□ -0.43
Trim50Q810I2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim50Q810I2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm13226-201ENSMUST00000117838 404 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm14921-201ENSMUST00000118643 908 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm14660-201ENSMUST00000119809 575 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm27731-201ENSMUST00000185192 107 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.39□□□□□ -0.43
Trim50Q810I2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Trim50Q810I2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim50Q810I2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.38□□□□□ -0.43
Trim50Q810I2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.38□□□□□ -0.43
Trim50Q810I2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.38□□□□□ -0.43
Trim50Q810I2 Gm45784-201ENSMUST00000188360 142 ntBASIC12.38□□□□□ -0.43
Trim50Q810I2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim50Q810I2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.38□□□□□ -0.43
Trim50Q810I2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim50Q810I2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms