Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.15□□□□□ -0.3
Trim62Q80V85 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trim62Q80V85 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim62Q80V85 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim62Q80V85 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim62Q80V85 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.15□□□□□ -0.31
Trim62Q80V85 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.14□□□□□ -0.31
Trim62Q80V85 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.14□□□□□ -0.31
Trim62Q80V85 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.14□□□□□ -0.31
Trim62Q80V85 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.14□□□□□ -0.31
Trim62Q80V85 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Olfr284-202ENSMUST00000206647 966 ntBASIC13.14□□□□□ -0.31
Trim62Q80V85 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim62Q80V85 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim62Q80V85 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim62Q80V85 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim62Q80V85 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim62Q80V85 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trim62Q80V85 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm12058-201ENSMUST00000118614 437 ntBASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim62Q80V85 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm18935-201ENSMUST00000212692 664 ntBASIC13.13□□□□□ -0.31
Trim62Q80V85 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim62Q80V85 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.13□□□□□ -0.31
Trim62Q80V85 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm9823-201ENSMUST00000051212 327 ntBASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim62Q80V85 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.13□□□□□ -0.31
Trim62Q80V85 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim62Q80V85 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms