Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm5419-201ENSMUST00000119301 527 ntBASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm18776-201ENSMUST00000188833 654 ntBASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.7□□□□□ -0.7
Ubr5Q80TP3 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ubr5Q80TP3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm11578-201ENSMUST00000118530 459 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm9166-201ENSMUST00000120293 561 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm18514-201ENSMUST00000218980 436 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ubr5Q80TP3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Trav11n-201ENSMUST00000200113 343 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm43852-201ENSMUST00000202098 917 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ubr5Q80TP3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms