Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.52□□□□□ -0.41
Scaf4Q6PFF0 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scaf4Q6PFF0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scaf4Q6PFF0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Gm5867-201ENSMUST00000063197 592 ntBASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Syt7-204ENSMUST00000223586 1344 ntBASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scaf4Q6PFF0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm12341-201ENSMUST00000119724 503 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm8227-201ENSMUST00000223306 571 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms