Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm37497-201ENSMUST00000195830 798 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rad54bQ6PFE3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Rad54bQ6PFE3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gm27331-201ENSMUST00000183705 60 ntBASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gm18018-201ENSMUST00000198273 408 ntBASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rad54bQ6PFE3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.76□□□□□ -0.37
Rad54bQ6PFE3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms