Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.9□□□□□ -0.5
Sox17Q61473 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox17Q61473 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.9□□□□□ -0.5
Sox17Q61473 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox17Q61473 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.9□□□□□ -0.5
Sox17Q61473 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Gm13813-201ENSMUST00000120998 787 ntBASIC11.9□□□□□ -0.5
Sox17Q61473 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sox17Q61473 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.9□□□□□ -0.5
Sox17Q61473 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox17Q61473 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 AC124732.2-201ENSMUST00000221977 316 ntBASIC11.9□□□□□ -0.5
Sox17Q61473 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox17Q61473 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox17Q61473 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.9□□□□□ -0.51
Sox17Q61473 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sox17Q61473 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox17Q61473 Gm13689-201ENSMUST00000119360 685 ntBASIC11.89□□□□□ -0.51
Sox17Q61473 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.89□□□□□ -0.51
Sox17Q61473 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.89□□□□□ -0.51
Sox17Q61473 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Gm26035-201ENSMUST00000083065 308 ntBASIC11.89□□□□□ -0.51
Sox17Q61473 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox17Q61473 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.89□□□□□ -0.51
Sox17Q61473 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.89□□□□□ -0.51
Sox17Q61473 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox17Q61473 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox17Q61473 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.88□□□□□ -0.51
Sox17Q61473 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox17Q61473 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox17Q61473 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox17Q61473 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.88□□□□□ -0.51
Sox17Q61473 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox17Q61473 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox17Q61473 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox17Q61473 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox17Q61473 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms