Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm13453-201ENSMUST00000118708 357 ntBASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm15376-201ENSMUST00000122258 783 ntBASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm5279-201ENSMUST00000199575 745 ntBASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Gm27618-201ENSMUST00000183671 60 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Chchd1-203ENSMUST00000224633 557 ntBASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav15-1-dv6-1Q5R1D2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms