Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav3-3Q5R1C3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav3-3Q5R1C3 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.52□□□□□ -0.88
Trav3-3Q5R1C3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm20553-201ENSMUST00000204205 844 ntBASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Gm45453-201ENSMUST00000211758 853 ntBASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav3-3Q5R1C3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms