Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.45□□□□□ -0.1
Gm28047Q3US59 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Gm6091-201ENSMUST00000098307 165 ntBASIC14.45□□□□□ -0.1
Gm28047Q3US59 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gm28047Q3US59 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm29649-201ENSMUST00000185649 419 ntBASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm38092-201ENSMUST00000195600 653 ntBASIC14.44□□□□□ -0.1
Gm28047Q3US59 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.44□□□□□ -0.1
Gm28047Q3US59 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.44□□□□□ -0.1
Gm28047Q3US59 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.44□□□□□ -0.1
Gm28047Q3US59 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm28047Q3US59 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Gm26927-201ENSMUST00000182385 965 ntBASIC14.43□□□□□ -0.1
Gm28047Q3US59 Gm19184-201ENSMUST00000196798 928 ntBASIC14.43□□□□□ -0.1
Gm28047Q3US59 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gm28047Q3US59 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.43□□□□□ -0.1
Gm28047Q3US59 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.42□□□□□ -0.1
Gm28047Q3US59 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.42□□□□□ -0.1
Gm28047Q3US59 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.42□□□□□ -0.1
Gm28047Q3US59 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.42□□□□□ -0.1
Gm28047Q3US59 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Gm24526-201ENSMUST00000082921 158 ntBASIC14.42□□□□□ -0.1
Gm28047Q3US59 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm28047Q3US59 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms