Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gm38223-201ENSMUST00000194484 695 ntBASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gtpbp10-211ENSMUST00000198799 648 ntBASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Daam2-202ENSMUST00000224595 1926 ntBASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Fndc4Q3TR08 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm15371-201ENSMUST00000117057 784 ntBASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm13689-201ENSMUST00000119360 685 ntBASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm18018-201ENSMUST00000198273 408 ntBASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Fndc4Q3TR08 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Fndc4Q3TR08 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.83□□□□□ -0.68
Fndc4Q3TR08 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms