Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Gm14704-201ENSMUST00000120300 874 ntBASIC12.07□□□□□ -0.48
Cxcr5Q04683 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cxcr5Q04683 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.06□□□□□ -0.48
Cxcr5Q04683 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.06□□□□□ -0.48
Cxcr5Q04683 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Cxcr5Q04683 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cxcr5Q04683 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.05□□□□□ -0.48
Cxcr5Q04683 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.05□□□□□ -0.48
Cxcr5Q04683 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.05□□□□□ -0.48
Cxcr5Q04683 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Gm15823-201ENSMUST00000064305 670 ntBASIC12.05□□□□□ -0.48
Cxcr5Q04683 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cxcr5Q04683 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cxcr5Q04683 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 142.9 ms