Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nkx3-2P97503 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.03□□□□□ -0.48
Nkx3-2P97503 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Gm6023-201ENSMUST00000118217 606 ntBASIC12.03□□□□□ -0.48
Nkx3-2P97503 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Gm44364-201ENSMUST00000198368 141 ntBASIC12.03□□□□□ -0.48
Nkx3-2P97503 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.03□□□□□ -0.48
Nkx3-2P97503 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.03□□□□□ -0.48
Nkx3-2P97503 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.03□□□□□ -0.48
Nkx3-2P97503 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Nkx3-2P97503 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Nkx3-2P97503 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Nkx3-2P97503 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm27516-201ENSMUST00000184237 98 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm21769-201ENSMUST00000211922 111 ntBASIC12.02□□□□□ -0.49
Nkx3-2P97503 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.02□□□□□ -0.49
Nkx3-2P97503 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms