Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim43bP86448 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.1□□□□□ -0.31
Trim43bP86448 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trim43bP86448 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trim43bP86448 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43bP86448 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43bP86448 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43bP86448 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43bP86448 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim43bP86448 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trim43bP86448 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim43bP86448 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim43bP86448 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim43bP86448 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trim43bP86448 Gm27847-201ENSMUST00000183711 107 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 Gm27375-201ENSMUST00000183799 107 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 Gm44124-201ENSMUST00000204159 472 ntBASIC13.09□□□□□ -0.31
Trim43bP86448 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim43bP86448 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trim43bP86448 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim43bP86448 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Trim43bP86448 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43bP86448 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43bP86448 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43bP86448 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43bP86448 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43bP86448 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43bP86448 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim43bP86448 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.08□□□□□ -0.32
Trim43bP86448 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim43bP86448 Gm5687-201ENSMUST00000118252 640 ntBASIC13.08□□□□□ -0.32
Trim43bP86448 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim43bP86448 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.08□□□□□ -0.32
Trim43bP86448 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trim43bP86448 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.08□□□□□ -0.32
Trim43bP86448 Itm2b-204ENSMUST00000228637 783 ntBASIC13.08□□□□□ -0.32
Trim43bP86448 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Gm10012-201ENSMUST00000078252 192 ntBASIC13.08□□□□□ -0.32
Trim43bP86448 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim43bP86448 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43bP86448 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms