Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SgcbP82349 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.36□□□□□ -0.59
SgcbP82349 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.35□□□□□ -0.59
SgcbP82349 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.35□□□□□ -0.59
SgcbP82349 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcbP82349 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SgcbP82349 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcbP82349 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
SgcbP82349 Gm8738-201ENSMUST00000172606 329 ntBASIC11.35□□□□□ -0.59
SgcbP82349 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.35□□□□□ -0.59
SgcbP82349 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.35□□□□□ -0.59
SgcbP82349 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.35□□□□□ -0.59
SgcbP82349 Gm5781-201ENSMUST00000219792 443 ntBASIC11.35□□□□□ -0.59
SgcbP82349 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.35□□□□□ -0.59
SgcbP82349 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SgcbP82349 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SgcbP82349 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.35□□□□□ -0.59
SgcbP82349 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SgcbP82349 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SgcbP82349 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SgcbP82349 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcbP82349 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SgcbP82349 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.34□□□□□ -0.59
SgcbP82349 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Gm22018-201ENSMUST00000104357 131 ntBASIC11.34□□□□□ -0.59
SgcbP82349 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.34□□□□□ -0.59
SgcbP82349 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcbP82349 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.34□□□□□ -0.59
SgcbP82349 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcbP82349 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcbP82349 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.34□□□□□ -0.59
SgcbP82349 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.34□□□□□ -0.59
SgcbP82349 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SgcbP82349 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.34□□□□□ -0.59
SgcbP82349 Gm32025-201ENSMUST00000217960 307 ntBASIC11.34□□□□□ -0.59
SgcbP82349 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.34□□□□□ -0.59
SgcbP82349 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SgcbP82349 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SgcbP82349 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms