Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CiitaP79621 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm6082-201ENSMUST00000215204 454 ntBASIC13.75□□□□□ -0.21
CiitaP79621 Gm8712-201ENSMUST00000221090 701 ntBASIC13.75□□□□□ -0.21
CiitaP79621 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.75□□□□□ -0.21
CiitaP79621 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.75□□□□□ -0.21
CiitaP79621 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CiitaP79621 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CiitaP79621 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CiitaP79621 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CiitaP79621 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CiitaP79621 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.74□□□□□ -0.21
CiitaP79621 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.74□□□□□ -0.21
CiitaP79621 Mir877-201ENSMUST00000104738 85 ntBASIC13.74□□□□□ -0.21
CiitaP79621 Gm14999-201ENSMUST00000121039 624 ntBASIC13.74□□□□□ -0.21
CiitaP79621 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.74□□□□□ -0.21
CiitaP79621 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.74□□□□□ -0.21
CiitaP79621 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CiitaP79621 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CiitaP79621 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.74□□□□□ -0.21
CiitaP79621 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.74□□□□□ -0.21
CiitaP79621 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.74□□□□□ -0.21
CiitaP79621 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CiitaP79621 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.74□□□□□ -0.21
CiitaP79621 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.74□□□□□ -0.21
CiitaP79621 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CiitaP79621 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.73□□□□□ -0.21
CiitaP79621 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.73□□□□□ -0.21
CiitaP79621 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CiitaP79621 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CiitaP79621 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Gm15236-201ENSMUST00000117309 379 ntBASIC13.73□□□□□ -0.21
CiitaP79621 Gm15808-201ENSMUST00000119046 604 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms