Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Cux2P70298 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Cux2P70298 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cux2P70298 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC20.36■□□□□ 0.85
Cux2P70298 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC20.36■□□□□ 0.85
Cux2P70298 Gm45856-201ENSMUST00000212752 416 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cux2P70298 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 CT009489.1-201ENSMUST00000227740 1893 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cux2P70298 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Gm10152-201ENSMUST00000193475 1344 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC20.36■□□□□ 0.85
Cux2P70298 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cux2P70298 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cux2P70298 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Cux2P70298 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 Gm8723-201ENSMUST00000166076 820 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Gm8701-201ENSMUST00000169259 874 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Gm18711-201ENSMUST00000199341 750 ntBASIC20.36■□□□□ 0.85
Cux2P70298 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cux2P70298 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC20.36■□□□□ 0.85
Cux2P70298 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Cux2P70298 Gm42941-201ENSMUST00000200347 1321 ntBASIC20.35■□□□□ 0.85
Cux2P70298 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC20.35■□□□□ 0.85
Cux2P70298 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cux2P70298 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cux2P70298 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC20.35■□□□□ 0.85
Cux2P70298 AC173482.6-201ENSMUST00000225889 1741 ntBASIC20.35■□□□□ 0.85
Cux2P70298 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Gm25766-201ENSMUST00000104101 131 ntBASIC20.35■□□□□ 0.85
Cux2P70298 Gm12419-201ENSMUST00000116649 636 ntBASIC20.35■□□□□ 0.85
Cux2P70298 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC20.35■□□□□ 0.85
Cux2P70298 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC20.35■□□□□ 0.85
Cux2P70298 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cux2P70298 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC20.35■□□□□ 0.85
Cux2P70298 Gm5537-201ENSMUST00000091117 1252 ntBASIC20.35■□□□□ 0.85
Cux2P70298 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cux2P70298 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC20.35■□□□□ 0.85
Cux2P70298 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cux2P70298 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC20.34■□□□□ 0.85
Cux2P70298 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Cux2P70298 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC20.34■□□□□ 0.85
Cux2P70298 Gm44506-201ENSMUST00000206278 965 ntBASIC20.34■□□□□ 0.85
Cux2P70298 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cux2P70298 Gm43045-201ENSMUST00000198725 2095 ntBASIC20.34■□□□□ 0.85
Cux2P70298 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cux2P70298 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC20.33■□□□□ 0.85
Cux2P70298 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cux2P70298 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cux2P70298 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cux2P70298 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC20.33■□□□□ 0.85
Cux2P70298 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cux2P70298 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cux2P70298 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cux2P70298 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms