Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Stra8P70278 Gm11424-201ENSMUST00000121929 829 ntBASIC17.55■□□□□ 0.4
Stra8P70278 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Stra8P70278 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.55■□□□□ 0.4
Stra8P70278 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.55■□□□□ 0.4
Stra8P70278 Gm7653-201ENSMUST00000214567 508 ntBASIC17.55■□□□□ 0.4
Stra8P70278 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.55■□□□□ 0.4
Stra8P70278 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC17.55■□□□□ 0.4
Stra8P70278 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Stra8P70278 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Stra8P70278 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC17.55■□□□□ 0.4
Stra8P70278 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC17.54■□□□□ 0.4
Stra8P70278 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC17.54■□□□□ 0.4
Stra8P70278 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Stra8P70278 Gm5638-201ENSMUST00000118618 1258 ntBASIC17.54■□□□□ 0.4
Stra8P70278 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.54■□□□□ 0.4
Stra8P70278 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.54■□□□□ 0.4
Stra8P70278 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Stra8P70278 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.54■□□□□ 0.4
Stra8P70278 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.54■□□□□ 0.4
Stra8P70278 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.54■□□□□ 0.4
Stra8P70278 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Stra8P70278 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC17.54■□□□□ 0.4
Stra8P70278 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.54■□□□□ 0.4
Stra8P70278 Gm44942-201ENSMUST00000096093 2072 ntBASIC17.54■□□□□ 0.4
Stra8P70278 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Stra8P70278 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
Stra8P70278 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Stra8P70278 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Stra8P70278 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Gm27177-202ENSMUST00000183514 2703 ntBASIC17.53■□□□□ 0.4
Stra8P70278 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC17.53■□□□□ 0.4
Stra8P70278 Nupl1-206ENSMUST00000225111 2936 ntBASIC17.53■□□□□ 0.4
Stra8P70278 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.53■□□□□ 0.4
Stra8P70278 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.53■□□□□ 0.4
Stra8P70278 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.53■□□□□ 0.4
Stra8P70278 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.53■□□□□ 0.4
Stra8P70278 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Stra8P70278 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Stra8P70278 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stra8P70278 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Stra8P70278 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms