Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ybx1P62960 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.01□□□□□ -0.33
Ybx1P62960 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Ybx1P62960 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ybx1P62960 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13□□□□□ -0.33
Ybx1P62960 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ybx1P62960 Gm9083-201ENSMUST00000120423 819 ntBASIC13□□□□□ -0.33
Ybx1P62960 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13□□□□□ -0.33
Ybx1P62960 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 Gm42997-202ENSMUST00000200321 985 ntBASIC13□□□□□ -0.33
Ybx1P62960 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13□□□□□ -0.33
Ybx1P62960 Gm43947-201ENSMUST00000203019 959 ntBASIC13□□□□□ -0.33
Ybx1P62960 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13□□□□□ -0.33
Ybx1P62960 AC154222.2-201ENSMUST00000225848 607 ntBASIC13□□□□□ -0.33
Ybx1P62960 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ybx1P62960 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Ybx1P62960 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ybx1P62960 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ybx1P62960 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ybx1P62960 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ybx1P62960 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.99□□□□□ -0.33
Ybx1P62960 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ybx1P62960 Gm14263-201ENSMUST00000117955 746 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ybx1P62960 Gm14999-201ENSMUST00000121039 624 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Gm22334-201ENSMUST00000158070 133 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.99□□□□□ -0.33
Ybx1P62960 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms