Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cks1bP61025 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cks1bP61025 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.1□□□□□ -0.95
Cks1bP61025 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 AC159196.2-201ENSMUST00000224082 1622 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
Cks1bP61025 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
Cks1bP61025 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Cks1bP61025 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.09□□□□□ -0.95
Cks1bP61025 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cks1bP61025 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm27494-201ENSMUST00000184735 189 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm18206-201ENSMUST00000207027 926 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cks1bP61025 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.09□□□□□ -0.95
Cks1bP61025 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cks1bP61025 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Cks1bP61025 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.09□□□□□ -0.96
Cks1bP61025 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.09□□□□□ -0.96
Cks1bP61025 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.08□□□□□ -0.96
Cks1bP61025 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1bP61025 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.08□□□□□ -0.96
Cks1bP61025 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm5566-201ENSMUST00000116118 459 ntBASIC9.08□□□□□ -0.96
Cks1bP61025 Gm15467-201ENSMUST00000120582 445 ntBASIC9.08□□□□□ -0.96
Cks1bP61025 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.08□□□□□ -0.96
Cks1bP61025 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms