Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sf3b6P59708 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.29□□□□□ -0.6
Sf3b6P59708 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.28□□□□□ -0.6
Sf3b6P59708 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.28□□□□□ -0.6
Sf3b6P59708 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm5279-201ENSMUST00000199575 745 ntBASIC11.28□□□□□ -0.6
Sf3b6P59708 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Sf3b6P59708 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.28□□□□□ -0.6
Sf3b6P59708 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sf3b6P59708 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3b6P59708 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3b6P59708 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3b6P59708 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3b6P59708 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sf3b6P59708 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Sf3b6P59708 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm14760-201ENSMUST00000121831 999 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm28631-201ENSMUST00000190740 334 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm42612-201ENSMUST00000197986 623 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm43170-201ENSMUST00000199827 612 ntBASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.27□□□□□ -0.61
Sf3b6P59708 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms