Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Nphp4P59240 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nphp4P59240 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nphp4P59240 AC171277.1-201ENSMUST00000216902 1441 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC17.03■□□□□ 0.32
Nphp4P59240 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Nphp4P59240 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Gm11331-201ENSMUST00000119764 288 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Gm12176-201ENSMUST00000121420 875 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC17.03■□□□□ 0.32
Nphp4P59240 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Gm27530-201ENSMUST00000184096 98 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC17.03■□□□□ 0.32
Nphp4P59240 Gm18038-201ENSMUST00000197900 485 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Gm44136-201ENSMUST00000203819 1106 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nphp4P59240 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
Nphp4P59240 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nphp4P59240 AC159308.2-201ENSMUST00000213592 2325 ntBASIC17.03■□□□□ 0.32
Nphp4P59240 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.02■□□□□ 0.32
Nphp4P59240 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Nphp4P59240 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC17.02■□□□□ 0.32
Nphp4P59240 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC17.02■□□□□ 0.32
Nphp4P59240 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Nphp4P59240 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Nphp4P59240 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nphp4P59240 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC17.02■□□□□ 0.31
Nphp4P59240 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Nphp4P59240 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Nphp4P59240 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.02■□□□□ 0.31
Nphp4P59240 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Mir219a-1-201ENSMUST00000083621 110 ntBASIC17.02■□□□□ 0.31
Nphp4P59240 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nphp4P59240 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Gm5525-201ENSMUST00000190438 1312 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.01■□□□□ 0.31
Nphp4P59240 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC17.01■□□□□ 0.31
Nphp4P59240 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nphp4P59240 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
Nphp4P59240 Gm6335-201ENSMUST00000118081 1194 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Gm13045-201ENSMUST00000119019 712 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Gm7816-201ENSMUST00000119884 1194 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Gm14247-201ENSMUST00000120950 237 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Gm15542-201ENSMUST00000121585 1194 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nphp4P59240 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC17.01■□□□□ 0.31
Nphp4P59240 Gm18711-201ENSMUST00000199341 750 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Gm44882-201ENSMUST00000205702 802 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.01■□□□□ 0.31
Nphp4P59240 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nphp4P59240 Gm44942-201ENSMUST00000096093 2072 ntBASIC17■□□□□ 0.31
Nphp4P59240 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nphp4P59240 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms