Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12□□□□□ -0.49
Nup43P59235 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nup43P59235 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Nup43P59235 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nup43P59235 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nup43P59235 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12□□□□□ -0.49
Nup43P59235 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12□□□□□ -0.49
Nup43P59235 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12□□□□□ -0.49
Nup43P59235 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12□□□□□ -0.49
Nup43P59235 Gm5904-201ENSMUST00000210286 865 ntBASIC12□□□□□ -0.49
Nup43P59235 Gm45880-201ENSMUST00000213041 853 ntBASIC12□□□□□ -0.49
Nup43P59235 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12□□□□□ -0.49
Nup43P59235 AC154462.2-201ENSMUST00000227519 370 ntBASIC12□□□□□ -0.49
Nup43P59235 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nup43P59235 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12□□□□□ -0.49
Nup43P59235 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nup43P59235 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nup43P59235 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.99□□□□□ -0.49
Nup43P59235 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.99□□□□□ -0.49
Nup43P59235 Gm16296-201ENSMUST00000159905 325 ntBASIC11.99□□□□□ -0.49
Nup43P59235 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Gm27572-201ENSMUST00000183702 255 ntBASIC11.99□□□□□ -0.49
Nup43P59235 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
Nup43P59235 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.99□□□□□ -0.49
Nup43P59235 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.99□□□□□ -0.49
Nup43P59235 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nup43P59235 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.99□□□□□ -0.49
Nup43P59235 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nup43P59235 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nup43P59235 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Nup43P59235 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nup43P59235 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup43P59235 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.98□□□□□ -0.49
Nup43P59235 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nup43P59235 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms