Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
NrlP54846 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NrlP54846 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NrlP54846 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
NrlP54846 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NrlP54846 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NrlP54846 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NrlP54846 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Gm7857-201ENSMUST00000117957 358 ntBASIC13.53□□□□□ -0.24
NrlP54846 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.53□□□□□ -0.24
NrlP54846 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Gm26361-201ENSMUST00000158868 186 ntBASIC13.53□□□□□ -0.24
NrlP54846 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Gm37986-201ENSMUST00000193285 383 ntBASIC13.53□□□□□ -0.24
NrlP54846 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.53□□□□□ -0.24
NrlP54846 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.53□□□□□ -0.24
NrlP54846 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NrlP54846 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.53□□□□□ -0.24
NrlP54846 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.53□□□□□ -0.24
NrlP54846 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.53□□□□□ -0.24
NrlP54846 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NrlP54846 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NrlP54846 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NrlP54846 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NrlP54846 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NrlP54846 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
NrlP54846 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NrlP54846 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NrlP54846 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NrlP54846 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
NrlP54846 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NrlP54846 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NrlP54846 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.52□□□□□ -0.25
NrlP54846 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.52□□□□□ -0.25
NrlP54846 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
NrlP54846 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NrlP54846 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.52□□□□□ -0.25
NrlP54846 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NrlP54846 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NrlP54846 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NrlP54846 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
NrlP54846 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NrlP54846 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NrlP54846 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.51□□□□□ -0.25
NrlP54846 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
NrlP54846 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.51□□□□□ -0.25
NrlP54846 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NrlP54846 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
NrlP54846 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.51□□□□□ -0.25
NrlP54846 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms