Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm11979-201ENSMUST00000119629 743 ntBASIC12.95□□□□□ -0.34
Sox1P53783 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.95□□□□□ -0.34
Sox1P53783 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sox1P53783 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.95□□□□□ -0.34
Sox1P53783 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.95□□□□□ -0.34
Sox1P53783 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox1P53783 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.95□□□□□ -0.34
Sox1P53783 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox1P53783 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sox1P53783 Gm24891-201ENSMUST00000104391 136 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Gm14274-201ENSMUST00000117182 615 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox1P53783 Gm16071-201ENSMUST00000119589 793 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox1P53783 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.94□□□□□ -0.34
Sox1P53783 Mir7677-201ENSMUST00000184226 67 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Gm9230-201ENSMUST00000188228 532 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Gm17826-201ENSMUST00000189720 798 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox1P53783 Gm44882-201ENSMUST00000205702 802 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Gm44980-201ENSMUST00000205826 314 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Gm45527-201ENSMUST00000211052 774 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Gm17827-201ENSMUST00000211825 742 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox1P53783 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.94□□□□□ -0.34
Sox1P53783 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox1P53783 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Sox1P53783 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox1P53783 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox1P53783 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Gm13809-201ENSMUST00000117921 597 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Gm12783-201ENSMUST00000121425 397 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 Gm6485-201ENSMUST00000160676 439 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.93□□□□□ -0.34
Sox1P53783 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Sox1P53783 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox1P53783 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox1P53783 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms