Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm22144-201ENSMUST00000157402 102 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm26989-201ENSMUST00000182608 749 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Lbx1P52955 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm44647-201ENSMUST00000207402 428 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Gm18460-201ENSMUST00000208088 464 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm3619-201ENSMUST00000219947 775 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm40879-201ENSMUST00000220759 612 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lbx1P52955 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lbx1P52955 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.3□□□□□ -0.44
Lbx1P52955 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.3□□□□□ -0.44
Lbx1P52955 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lbx1P52955 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.3□□□□□ -0.44
Lbx1P52955 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lbx1P52955 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lbx1P52955 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lbx1P52955 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.29□□□□□ -0.44
Lbx1P52955 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.29□□□□□ -0.44
Lbx1P52955 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.29□□□□□ -0.44
Lbx1P52955 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.29□□□□□ -0.44
Lbx1P52955 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Lbx1P52955 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lbx1P52955 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Lbx1P52955 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.28□□□□□ -0.44
Lbx1P52955 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lbx1P52955 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms