Protein–RNA interactions for Protein: P50207

Hoxc13, Homeobox protein Hox-C13, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13P50207 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc13P50207 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc13P50207 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc13P50207 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc13P50207 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxc13P50207 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc13P50207 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc13P50207 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Mir877-201ENSMUST00000104738 85 ntBASIC13.8□□□□□ -0.2
Hoxc13P50207 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxc13P50207 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.8□□□□□ -0.2
Hoxc13P50207 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.8□□□□□ -0.2
Hoxc13P50207 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.8□□□□□ -0.2
Hoxc13P50207 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc13P50207 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.8□□□□□ -0.2
Hoxc13P50207 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxc13P50207 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.8□□□□□ -0.2
Hoxc13P50207 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc13P50207 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hoxc13P50207 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc13P50207 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc13P50207 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxc13P50207 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Gm44967-201ENSMUST00000207047 631 ntBASIC13.79□□□□□ -0.2
Hoxc13P50207 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Gm9996-201ENSMUST00000070359 913 ntBASIC13.79□□□□□ -0.2
Hoxc13P50207 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Hoxc13P50207 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc13P50207 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.79□□□□□ -0.2
Hoxc13P50207 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc13P50207 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Gm15236-201ENSMUST00000117309 379 ntBASIC13.78□□□□□ -0.2
Hoxc13P50207 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Rprl1-202ENSMUST00000198476 238 ntBASIC13.78□□□□□ -0.2
Hoxc13P50207 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc13P50207 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.78□□□□□ -0.2
Hoxc13P50207 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms